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Nanopore metagenomics enables rapid clinical diagnosis of bacterial lower respiratory infection | Nature Biotechnology
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Frontiers | Metagenomic Data Assembly – The Way of Decoding Unknown Microorganisms
Recentrifuge: Robust comparative analysis and contamination removal for metagenomics | PLOS Computational Biology
Genes | Free Full-Text | Offline Next Generation Metagenomics Sequence Analysis Using MinION Detection Software (MINDS)
Frontiers | Metagenomic Analysis Revealed Differences in Composition and Function Between Liquid-Associated and Solid-Associated Microorganisms of Sheep Rumen
Identifying viral sequences in TCGA data using Kraken and Centrifuge - Seven Bridges
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Metagenomic next-generation sequencing to identify pathogens and cancer in lung biopsy tissue - eBioMedicine
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Real-time metagenomics-based diagnosis of community-acquired meningitis: A prospective series, southern France - eBioMedicine
Frontiers | Machine Learning and Deep Learning Applications in Metagenomic Taxonomy and Functional Annotation
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AMAISE: a machine learning approach to index-free sequence enrichment | Communications Biology
CCMetagen: comprehensive and accurate identification of eukaryotes and prokaryotes in metagenomic data | Genome Biology | Full Text
A streamlined clinical metagenomic sequencing protocol for rapid pathogen identification | Scientific Reports
The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples | Environmental Microbiome | Full Text
JCI - Metagenome analyses identify human endogenous retrovirus–K113 (HML-2) subtype in glioblastoma
Optimization of cerebrospinal fluid microbial DNA metagenomic sequencing diagnostics | Scientific Reports
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